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Gholam Khodakaramian

Gholam Khodakaramian

Academic rank: Professor
ORCID:
Education: PhD.
ScopusId: 18935259800
HIndex:
Faculty: Faculty of Agriculture
Address:
Phone: 08134424091

Research

Title
First report of garlic soft rot caused byPectobacterium carotovorum subsp.carotovorumin Iran
Type
JournalPaper
Keywords
,garlic, soft rot Pectobacterium bulb disease
Year
2018
Journal JOURNAL OF PLANT PATHOLOGY
DOI
Researchers ، Gholam Khodakaramian ،

Abstract

Garlic, a commonly grown herb in the garden, is one of the most important and valuable products in Iran with a cultiva-tion area of about 3000 ha. However garlic is also prone to several soil-born diseases. In 2014, a soft rot disease was observed on the bulb base of garlic in Hamadan province of Iran. Bacterial colonies were isolated from symptomatic bulbs and cloves. Twenty representative bacterial isolates were Gram-negative, facultative anaerobic, able to soften potato slices and to grow at 37 °C. They were negative for oxidase, urease and sensitivity to erythromycin, positive for catalase, lecithinase, gelatinase and utilization of malonate and citrate. Isolates produced acid from lactose, cellobiose, raffinose, tre-halose, glucose, rhamnose and sucrose (Schaad et al.2001). Pectobacterium carotovorumsubsp. carotovorum(Pcc) ATCC 15713 was used as positive control. For pathogenicity tests, garlic cloves were surface sterilized by ethyl alcohol 70%, washed with sterilized distilled water, and inoculated with 20μl of 108 CFU ml −1 suspensions of seven represen-tative strains whichwere grown for 48 h on nutrient agar (NA) medium at 26 °C. Symptoms occurred on bulbs 3 to 5 days after inoculation and appeared similar to those occurring on naturally infected plants, but the control samples, inoculated with sterilized distilled water, remained healthy. To further identify these pectolytic strains, a multi locus sequence typing (MLST) approach was employed. To this end, partial nucleo-tide sequences of the housekeeping genes, mdh(GenBank accession No. MG421001),recA (MG421002), gapA (MG421003) and 16S rRNA (MG388299) showed 99, 99.2, 98.9 and 99.8% similarity to thePccATCC 15713 reference strain, respectively. Based on phenotypic and genotypic characteristics the bac-terium that causes soft rot of garlic bulb was identified asPcc. To our knowledge, this is the first report of soft rot caused by Pccon garlic from Iran